Package: corrsieve 1.6-9
corrsieve: Software for Summarising and Evaluating STRUCTURE Output
Statistical summary of STRUCTURE output. STRUCTURE is a K-means clustering method for inferring population structure and assigning individuals to populations using genetic data. Pritchard JK, Stephens M, Donnelly PJ (2000) <doi:10.1093/genetics/155.2.945>. <https://web.stanford.edu/group/pritchardlab/structure.html>.
Authors:
corrsieve_1.6-9.tar.gz
corrsieve_1.6-9.zip(r-4.5)corrsieve_1.6-9.zip(r-4.4)corrsieve_1.6-9.zip(r-4.3)
corrsieve_1.6-9.tgz(r-4.4-any)corrsieve_1.6-9.tgz(r-4.3-any)
corrsieve_1.6-9.tar.gz(r-4.5-noble)corrsieve_1.6-9.tar.gz(r-4.4-noble)
corrsieve_1.6-9.tgz(r-4.4-emscripten)corrsieve_1.6-9.tgz(r-4.3-emscripten)
corrsieve.pdf |corrsieve.html✨
corrsieve/json (API)
| # Install 'corrsieve' in R: |
| install.packages('corrsieve', repos = c('https://campanam.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/campanam/rcorrsieve/issues
Last updated 3 years agofrom:de13f325ef. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 07 2024 |
| R-4.5-win | NOTE | Nov 07 2024 |
| R-4.5-linux | NOTE | Nov 07 2024 |
| R-4.4-win | NOTE | Nov 07 2024 |
| R-4.4-mac | NOTE | Nov 07 2024 |
| R-4.3-win | NOTE | Nov 07 2024 |
| R-4.3-mac | NOTE | Nov 07 2024 |
Exports:calc.deltacorr.QmatrixmatrixCorrQmatrixFiltread.structrowncolMatrixsummarise.Fstsummarise.lnPDsummarize.Fstsummarize.lnPD
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calc.delta | calc.delta |
| Corr.Qmatrix | corr.Qmatrix |
| MatrixCorr | matrixCorr-class |
| MatrixCorr constructor | matrixCorr |
| QmatrixFilt | QmatrixFilt-class |
| QmatrixFilt constructor | QmatrixFilt |
| Read.struct | read.struct |
| RowncolMatrix | rowncolMatrix-class |
| RowncolMatrix constructor | rowncolMatrix |
| Summarise.Fst | summarise.Fst summarize.Fst |
| Summarise.lnPD | summarise.lnPD summarize.lnPD |
